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plecb plectin b [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129449069, updated on 10-Apr-2024

Summary

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Gene symbol
plecb
Gene description
plectin b
See related
EnsemblRapid:ENSIRMG00000003989
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
Orthologs
zebrafish all
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Genomic context

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See plecb in Genome Data Viewer
Location:
chromosome: 8
Exon count:
37
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 8 NC_073344.1 (1984313..2053764)

Chromosome 8 - NC_073344.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129448411 Neighboring gene uncharacterized LOC129449081 Neighboring gene microtubule actin crosslinking factor 1b Neighboring gene uncharacterized LOC129449082 Neighboring gene solute carrier family 52 member 3-2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073344.1 Chromosome 8 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073344.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    1984313..2053764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055211823.1 → XP_055067798.1  plectin isoform X1

    Related
    ENSIRMP00000035401.1, ENSIRMT00000045385.1

  2. XM_055211826.1 → XP_055067801.1  plectin isoform X4

    Related
    ENSIRMP00000035448.1, ENSIRMT00000045432.1

  3. XM_055211824.1 → XP_055067799.1  plectin isoform X2

    Related
    ENSIRMP00000035769.1, ENSIRMT00000045755.1

  4. XM_055211825.1 → XP_055067800.1  plectin isoform X3

    Related
    ENSIRMP00000035760.1, ENSIRMT00000045746.1
Nucleotide Protein
Heading Accession and Version

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