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LOC129444882 carbohydrate sulfotransferase 12-like [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129444882, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129444882
Gene description
carbohydrate sulfotransferase 12-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
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Genomic context

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See LOC129444882 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 6 NC_073342.1 (39237879..39241703, complement)

Chromosome 6 - NC_073342.1Genomic Context describing neighboring genes Neighboring gene gastrin/cholecystokinin type B receptor-like Neighboring gene uncharacterized LOC129444888 Neighboring gene kinesin-like protein KIF19 Neighboring gene eukaryotic translation initiation factor 3 subunit B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073342.1 Chromosome 6 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073342.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    39237879..39241703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055205889.1 → XP_055061864.1  carbohydrate sulfotransferase 12-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases