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LOC129441858 mannose-binding protein-like [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129441858, updated on 10-Apr-2024

Summary

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Gene symbol
LOC129441858
Gene description
mannose-binding protein-like
See related
EnsemblRapid:ENSIRMG00000012386
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
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Genomic context

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See LOC129441858 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 5 NC_073341.1 (14344212..14355421)

Chromosome 5 - NC_073341.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129441868 Neighboring gene uncharacterized LOC129441872 Neighboring gene mannose-binding protein-like Neighboring gene interferon-induced very large GTPase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073341.1 Chromosome 5 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein A-like; mannose-binding protein-like; pulmonary surfactant-associated protein D-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073341.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    14344212..14355421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055201586.1 → XP_055057561.1  mannose-binding protein A-like isoform X2

    Related
    ENSIRMP00000022181.1, ENSIRMT00000028608.1

  2. XM_055201585.1 → XP_055057560.1  pulmonary surfactant-associated protein D-like isoform X1

    Related
    ENSIRMP00000022180.1, ENSIRMT00000028606.1

  3. XM_055201587.1 → XP_055057562.1  mannose-binding protein-like isoform X3

Nucleotide Protein
Heading Accession and Version

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