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b3gnt5a UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129427089, updated on 2-May-2024

Summary

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Gene symbol
b3gnt5a
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a
See related
EnsemblRapid:ENSIRMG00000025526
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
Orthologs
zebrafish all
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Genomic context

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See b3gnt5a in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 21 NC_073357.1 (21289677..21294383)

Chromosome 21 - NC_073357.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129428057 Neighboring gene epithelial cell transforming 2 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene solute carrier family 4 member 10a Neighboring gene T-box brain transcription factor 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073357.1 Chromosome 21 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073357.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    21289677..21294383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055183294.1 → XP_055039269.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A

    Related
    ENSIRMP00000044192.1, ENSIRMT00000059434.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases