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LOC129421907 C-terminal binding protein 1 [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129421907, updated on 10-Apr-2024

Summary

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Gene symbol
LOC129421907
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSIRMG00000028063
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
Orthologs
human zebrafish all
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Genomic context

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See LOC129421907 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 18 NC_073354.1 (27767409..27795592, complement)

Chromosome 18 - NC_073354.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:ch211-175m2.4 Neighboring gene protein phosphatase 2, regulatory subunit B, gamma b Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene aldolase b, fructose-bisphosphate

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073354.1 Chromosome 18 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of mud loach (Misgurnus anguillicaudatus) skin transcriptome to identify putative genes involved in immunity and epidermal mucus secretion. Long Y, et al. PLoS One, 2013. PMID 23437293, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073354.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    27767409..27795592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055177499.1 → XP_055033474.1  C-terminal-binding protein 1 isoform X2

    Related
    ENSIRMP00000047761.1, ENSIRMT00000066708.1

  2. XM_055177498.1 → XP_055033473.1  C-terminal-binding protein 1 isoform X1

    Related
    ENSIRMP00000047759.1, ENSIRMT00000066706.1
Nucleotide Protein
Heading Accession and Version

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