U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LIN28AP1 LIN28A pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 129402, updated on 17-Sep-2024

Summary

Official Symbol
LIN28AP1provided by HGNC
Official Full Name
LIN28A pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:38055
See related
AllianceGenome:HGNC:38055
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LIN28AP1 in Genome Data Viewer
Location:
2q32.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (183260569..183261463)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (183749633..183750527)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (184125297..184126191)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124907917 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:183989221-183989989 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:184037030-184037616 Neighboring gene uncharacterized LOC124906103 Neighboring gene nucleoporin 35 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:184147449-184148046 Neighboring gene NANOG hESC enhancer GRCh37_chr2:184156752-184157274 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr2:184375873-184376482 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr2:184375263-184375872 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:184394201-184394838 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:184394839-184395475 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:184408305-184408804 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16839 Neighboring gene calcyclin binding protein pseudogene 2 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:184543441-184544193 Neighboring gene NANOG hESC enhancer GRCh37_chr2:184616415-184616980 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:184714487-184715024 Neighboring gene uncharacterized LOC124907918

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021592.2 

    Range
    101..995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    183260569..183261463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    183749633..183750527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)