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si:dkey-121b10.7 heparan sulfate glucosamine 3-O-sulfotransferase 6 [ Poeciliopsis prolifica (blackstripe livebearer) ]

Gene ID: 129377725, updated on 26-Mar-2024

Summary

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Gene symbol
si:dkey-121b10.7
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Poeciliopsis prolifica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poeciliopsis
Orthologs
zebrafish all
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Genomic context

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See si:dkey-121b10.7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_04 current Auburn_PproV2 (GCF_027474105.1) Unplaced Scaffold NW_026562424.1 (618377..628635, complement)

NW_026562424.1Genomic Context describing neighboring genes Neighboring gene MTOR associated protein, LST8 homolog (S. cerevisiae) Neighboring gene meiosis specific with OB-fold Neighboring gene uncharacterized LOC129377744 Neighboring gene leucine carboxyl methyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026562424 Unplaced Scaffold Reference Auburn_PproV2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027474105.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Auburn_PproV2

Genomic

  1. NW_026562424.1 Reference Auburn_PproV2

    Range
    618377..628635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055057853.1 → XP_054913828.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases