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si:dkey-219c10.4 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Poeciliopsis prolifica (blackstripe livebearer) ]

Gene ID: 129374589, updated on 26-Mar-2024

Summary

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Gene symbol
si:dkey-219c10.4
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Gene type
protein coding
RefSeq status
MODEL
Organism
Poeciliopsis prolifica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poeciliopsis
Orthologs
zebrafish all
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Genomic context

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See si:dkey-219c10.4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current Auburn_PproV2 (GCF_027474105.1) Unplaced Scaffold NW_026562411.1 (296686..303996)

NW_026562411.1Genomic Context describing neighboring genes Neighboring gene cytoplasmic linker associated protein 1a Neighboring gene small nucleolar RNA ACA64 Neighboring gene nucleolar protein interacting with the FHA domain of MKI67 Neighboring gene glycerol kinase-like Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026562411 Unplaced Scaffold Reference Auburn_PproV2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027474105.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Auburn_PproV2

Genomic

  1. NW_026562411.1 Reference Auburn_PproV2

    Range
    296686..303996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055053092.1 → XP_054909067.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

  2. XM_055053093.1 → XP_054909068.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

  3. XM_055053094.1 → XP_054909069.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

  4. XM_055053095.1 → XP_054909070.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

Nucleotide Protein
Heading Accession and Version

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