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ano5b anoctamin 5b [ Poeciliopsis prolifica (blackstripe livebearer) ]

Gene ID: 129369433, updated on 26-Mar-2024

Summary

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Gene symbol
ano5b
Gene description
anoctamin 5b
Gene type
protein coding
RefSeq status
MODEL
Organism
Poeciliopsis prolifica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poeciliopsis
Also known as
ANO5
Orthologs
zebrafish all
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Genomic context

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See ano5b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_04 current Auburn_PproV2 (GCF_027474105.1) Unplaced Scaffold NW_026562396.1 (670714..692935)

NW_026562396.1Genomic Context describing neighboring genes Neighboring gene cartilage intermediate layer protein, nucleotide pyrophosphohydrolase Neighboring gene immunoglobulin superfamily, DCC subclass, member 3 Neighboring gene solute carrier family 17 member 6b Neighboring gene growth arrest-specific 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026562396 Unplaced Scaffold Reference Auburn_PproV2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027474105.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Auburn_PproV2

Genomic

  1. NW_026562396.1 Reference Auburn_PproV2

    Range
    670714..692935
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055044826.1 → XP_054900801.1  anoctamin-5b isoform X1

  2. XM_055044827.1 → XP_054900802.1  anoctamin-5b isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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