U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sgca sarcoglycan, alpha [ Poeciliopsis prolifica (blackstripe livebearer) ]

Gene ID: 129367966, updated on 26-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
sgca
Gene description
sarcoglycan, alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Poeciliopsis prolifica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poeciliopsis
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See sgca in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current Auburn_PproV2 (GCF_027474105.1) Unplaced Scaffold NW_026562393.1 (3666972..3671502, complement)

NW_026562393.1Genomic Context describing neighboring genes Neighboring gene inactive all-trans-retinol 13,14-reductase Neighboring gene collagen, type I, alpha 1b Neighboring gene neurabin-2-like Neighboring gene PR domain containing 9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_026562393 Unplaced Scaffold Reference Auburn_PproV2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027474105.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Auburn_PproV2

Genomic

  1. NW_026562393.1 Reference Auburn_PproV2

    Range
    3666972..3671502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055042691.1 → XP_054898666.1  alpha-sarcoglycan

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.