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CHRNE cholinergic receptor nicotinic epsilon subunit [ Eublepharis macularius ]

Gene ID: 129340372, updated on 3-Apr-2024

Summary

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Gene symbol
CHRNE
Gene description
cholinergic receptor nicotinic epsilon subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Eublepharis macularius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Eublepharidae; Eublepharinae; Eublepharis
Orthologs
human mouse all
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Genomic context

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See CHRNE in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current MPM_Emac_v1.0 (GCF_028583425.1) 12 NC_072801.1 (80331642..80341062, complement)

Chromosome 12 - NC_072801.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 167 Neighboring gene solute carrier family 25 member 11 Neighboring gene glycoprotein Ib platelet subunit alpha Neighboring gene misshapen like kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072801.1 Chromosome 12 Reference MPM_Emac_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028583425.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPM_Emac_v1.0 Primary Assembly

Genomic

  1. NC_072801.1 Reference MPM_Emac_v1.0 Primary Assembly

    Range
    80331642..80341062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054995141.1 → XP_054851116.1  acetylcholine receptor subunit epsilon isoform X2

    UniProtKB/TrEMBL
    A0AA97LDL0

  2. XM_054995142.1 → XP_054851117.1  acetylcholine receptor subunit epsilon isoform X3

    UniProtKB/TrEMBL
    A0AA97LGC9

  3. XM_054995140.1 → XP_054851115.1  acetylcholine receptor subunit epsilon isoform X1

    UniProtKB/TrEMBL
    A0AA97K7G2
Nucleotide Protein
Heading Accession and Version

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