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LOC129321957 ribosomal RNA small subunit methyltransferase, mitochondrial [ Prosopis cineraria ]

Gene ID: 129321957, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129321957
Gene description
ribosomal RNA small subunit methyltransferase, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Prosopis cineraria
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Caesalpinioideae; mimosoid clade; Mimoseae; Prosopis
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Genomic context

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See LOC129321957 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2901754v1 (GCF_029017545.1) Unplaced Scaffold NW_026555341.1 (1437931..1439041, complement)

NW_026555341.1Genomic Context describing neighboring genes Neighboring gene CDK5RAP1-like protein Neighboring gene uncharacterized LOC129322917 Neighboring gene beta-galactosidase 3 Neighboring gene thioredoxin H-type

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026555341 Unplaced Scaffold Reference ASM2901754v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (adenine-N6,N6-)-dimethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029017545.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2901754v1 Primary Assembly

Genomic

  1. NW_026555341.1 Reference ASM2901754v1 Primary Assembly

    Range
    1437931..1439041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054967969.1 → XP_054823944.1  LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase, mitochondrial

Nucleotide Protein
Heading Accession and Version

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