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LOC129305622 beta-1,4-xylosyltransferase IRX9-like [ Prosopis cineraria ]

Gene ID: 129305622, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129305622
Gene description
beta-1,4-xylosyltransferase IRX9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Prosopis cineraria
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Caesalpinioideae; mimosoid clade; Mimoseae; Prosopis
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC129305622 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2901754v1 (GCF_029017545.1) Unplaced Scaffold NW_026555334.1 (41948998..41951122)

NW_026555334.1Genomic Context describing neighboring genes Neighboring gene importin subunit alpha-9 Neighboring gene DEAD-box ATP-dependent RNA helicase 57 Neighboring gene beta-1,4-xylosyltransferase IRX9-like Neighboring gene protein IQ-DOMAIN 2-like Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026555334 Unplaced Scaffold Reference ASM2901754v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucuronoxylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type secondary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-xylosyltransferase IRX9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029017545.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2901754v1 Primary Assembly

Genomic

  1. NW_026555334.1 Reference ASM2901754v1 Primary Assembly

    Range
    41948998..41951122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054945607.1 → XP_054801582.1  beta-1,4-xylosyltransferase IRX9-like

Nucleotide Protein
Heading Accession and Version

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