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LOC129292794 starch synthase 3, chloroplastic/amyloplastic [ Prosopis cineraria ]

Gene ID: 129292794, updated on 18-Sep-2024

Summary

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Gene symbol
LOC129292794
Gene description
starch synthase 3, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Prosopis cineraria
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Caesalpinioideae; mimosoid clade; Mimoseae; Prosopis
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Genomic context

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See LOC129292794 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2901754v1 (GCF_029017545.1) Unplaced Scaffold NW_026555345.1 (5569528..5583323)

NW_026555345.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g11710, mitochondrial Neighboring gene ATP synthase gamma chain, chloroplastic Neighboring gene uncharacterized LOC129293988 Neighboring gene autophagy-related protein 8C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026555345 Unplaced Scaffold Reference ASM2901754v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 3, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029017545.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2901754v1 Primary Assembly

Genomic

  1. NW_026555345.1 Reference ASM2901754v1 Primary Assembly

    Range
    5569528..5583323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054930440.1 → XP_054786415.1  starch synthase 3, chloroplastic/amyloplastic

Nucleotide Protein
Heading Accession and Version

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