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LOC129282641 protein O-mannosyl-transferase TMTC3-like [ Lytechinus pictus (painted urchin) ]

Gene ID: 129282641, updated on 2-Apr-2024

Summary

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Gene symbol
LOC129282641
Gene description
protein O-mannosyl-transferase TMTC3-like
See related
EnsemblRapid:LOC129282567 EnsemblRapid:LOC129282641
Gene type
protein coding
RefSeq status
MODEL
Organism
Lytechinus pictus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Temnopleuroida; Toxopneustidae; Lytechinus
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Genomic context

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See LOC129282641 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_03 current Lp3.0 (GCF_037042905.1) 19 NC_087263.1 (5885641..5909958, complement)
RS_2023_03 previous assembly UCSD_Lpic_2.1 (GCF_015342785.2) 19 NC_067112.1 (11728135..11747384, complement)

Chromosome 19 - NC_087263.1Genomic Context describing neighboring genes Neighboring gene cyclic AMP-responsive element-binding protein 3-like protein 2 Neighboring gene T-complex protein 11-like protein 1 Neighboring gene histamine H3 receptor-like Neighboring gene GDP-L-fucose synthase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037042905.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lp3.0

Genomic

  1. NC_087263.1 Reference Lp3.0

    Range
    5885641..5909958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064113855.1 → XP_063969925.1  protein O-mannosyl-transferase TMTC3-like

RNA

  1. XR_010296590.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases