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LOC129266321 aspartyl/asparaginyl beta-hydroxylase-like [ Lytechinus pictus (painted urchin) ]

Gene ID: 129266321, updated on 2-Apr-2024

Summary

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Gene symbol
LOC129266321
Gene description
aspartyl/asparaginyl beta-hydroxylase-like
See related
EnsemblRapid:LOC129261665 EnsemblRapid:LOC129266321
Gene type
protein coding
RefSeq status
MODEL
Organism
Lytechinus pictus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Temnopleuroida; Toxopneustidae; Lytechinus
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Genomic context

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See LOC129266321 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_03 current Lp3.0 (GCF_037042905.1) 1 NC_087245.1 (35104749..35143484)
RS_2023_03 previous assembly UCSD_Lpic_2.1 (GCF_015342785.2) 1 NC_067094.1 (41232781..41270752)

Chromosome 1 - NC_087245.1Genomic Context describing neighboring genes Neighboring gene splicing factor 1-like Neighboring gene splicing factor 1-like Neighboring gene soluble scavenger receptor cysteine-rich domain-containing protein SSC5D-like Neighboring gene uncharacterized LOC129269891

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037042905.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lp3.0

Genomic

  1. NC_087245.1 Reference Lp3.0

    Range
    35104749..35143484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064104431.1 → XP_063960501.1  aspartyl/asparaginyl beta-hydroxylase-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases