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SWIP strumpellin and WASH-interacting protein [ Anastrepha obliqua ]

Gene ID: 129236819, updated on 23-May-2024

Summary

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Gene symbol
SWIP
Gene description
strumpellin and WASH-interacting protein
See related
EnsemblRapid:LOC129236819
Gene type
protein coding
RefSeq status
MODEL
Organism
Anastrepha obliqua
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Anastrepha
Orthologs
fruit fly all
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Genomic context

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See SWIP in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current idAnaObli1_1.0 (GCF_027943255.1) 2 NC_072893.1 (95565220..95571179, complement)

Chromosome 2 - NC_072893.1Genomic Context describing neighboring genes Neighboring gene potassium channel subfamily K member 1-like Neighboring gene uncharacterized LOC129239311 Neighboring gene small wing phospholipase C gamma 1 Neighboring gene sodium leak channel non-selective protein na Neighboring gene plasminogen receptor (KT)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072893.1 Chromosome 2 Reference idAnaObli1_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomic approach reveals strong signatures of introgression in the rapid diversification of neotropical true fruit flies (Anastrepha: Tephritidae). Congrains C, et al. Mol Phylogenet Evol, 2021 Sep. PMID 33984467
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027943255.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnaObli1_1.0

Genomic

  1. NC_072893.1 Reference idAnaObli1_1.0

    Range
    95565220..95571179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054871063.1 → XP_054727038.1  WASH complex subunit 4

    Related
    XP_054727038.1, XM_054871063.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases