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LOC129111554 inositol polyphosphate-4-phosphatase type I A-like [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129111554, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129111554
Gene description
inositol polyphosphate-4-phosphatase type I A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
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Genomic context

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See LOC129111554 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 22 NC_072470.1 (3097077..3131335)

Chromosome 22 - NC_072470.1Genomic Context describing neighboring genes Neighboring gene inactive dipeptidyl peptidase 10-like Neighboring gene sodium/hydrogen exchanger 2-like Neighboring gene neuronal acetylcholine receptor subunit alpha-2-like Neighboring gene alsin Rho guanine nucleotide exchange factor ALS2 b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072470.1 Chromosome 22 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol polyphosphate-4-phosphatase type I A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072470.1 Reference Afim_UVic_2022

    Range
    3097077..3131335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054623539.1 → XP_054479514.1  inositol polyphosphate-4-phosphatase type I A-like isoform X1

  2. XM_054623538.1 → XP_054479513.1  inositol polyphosphate-4-phosphatase type I A-like isoform X1

  3. XM_054623543.1 → XP_054479518.1  inositol polyphosphate-4-phosphatase type I A-like isoform X4

  4. XM_054623541.1 → XP_054479516.1  inositol polyphosphate-4-phosphatase type I A-like isoform X2

  5. XM_054623542.1 → XP_054479517.1  inositol polyphosphate-4-phosphatase type I A-like isoform X3

  6. XM_054623540.1 → XP_054479515.1  inositol polyphosphate-4-phosphatase type I A-like isoform X1

  7. XM_054623545.1 → XP_054479520.1  inositol polyphosphate-4-phosphatase type I A-like isoform X6

  8. XM_054623544.1 → XP_054479519.1  inositol polyphosphate-4-phosphatase type I A-like isoform X5

Nucleotide Protein
Heading Accession and Version

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