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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129107031, updated on 26-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 18 NC_072466.1 (23548259..23589279)

Chromosome 18 - NC_072466.1Genomic Context describing neighboring genes Neighboring gene adenosylmethionine decarboxylase 1 Neighboring gene cyclin-dependent kinase 19 Neighboring gene probable ribonuclease ZC3H12D Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene glycoprotein integral membrane 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072466.1 Chromosome 18 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072466.1 Reference Afim_UVic_2022

    Range
    23548259..23589279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054618368.1 → XP_054474343.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  2. XM_054618372.1 → XP_054474347.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

  3. XM_054618371.1 → XP_054474346.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

  4. XM_054618373.1 → XP_054474348.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

  5. XM_054618374.1 → XP_054474349.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X5

  6. XM_054618369.1 → XP_054474344.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  7. XM_054618370.1 → XP_054474345.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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