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pde9aa phosphodiesterase 9aa [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129104356, updated on 26-Mar-2024

Summary

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Gene symbol
pde9aa
Gene description
phosphodiesterase 9aa
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
human zebrafish all
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Genomic context

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See pde9aa in Genome Data Viewer
Location:
chromosome: 16
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 16 NC_072464.1 (5287823..5325536)

Chromosome 16 - NC_072464.1Genomic Context describing neighboring genes Neighboring gene ribosomal RNA processing protein 1 homolog B-like Neighboring gene solute carrier family 37 member 1 Neighboring gene uncharacterized LOC129105111 Neighboring gene WD repeat domain 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072464.1 Chromosome 16 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072464.1 Reference Afim_UVic_2022

    Range
    5287823..5325536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054615004.1 → XP_054470979.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

  2. XM_054615005.1 → XP_054470980.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

  3. XM_054615006.1 → XP_054470981.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

  4. XM_054615008.1 → XP_054470983.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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