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slc37a1 solute carrier family 37 member 1 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129104272, updated on 11-Apr-2024

Summary

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Gene symbol
slc37a1
Gene description
solute carrier family 37 member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
human zebrafish all
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Genomic context

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See slc37a1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 16 NC_072464.1 (5251079..5279440)

Chromosome 16 - NC_072464.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129104277 Neighboring gene ribosomal RNA processing protein 1 homolog B-like Neighboring gene phosphodiesterase 9aa Neighboring gene WD repeat domain 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072464.1 Chromosome 16 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucose 6-phosphate:phosphate antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose-6-phosphate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphate ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucose-6-phosphate exchanger SLC37A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072464.1 Reference Afim_UVic_2022

    Range
    5251079..5279440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054614866.1 → XP_054470841.1  glucose-6-phosphate exchanger SLC37A1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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