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plcb2 phospholipase C, beta 2 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129103018, updated on 26-Mar-2024

Summary

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Gene symbol
plcb2
Gene description
phospholipase C, beta 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
zebrafish all
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Genomic context

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See plcb2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 15 NC_072463.1 (18641750..18659585)

Chromosome 15 - NC_072463.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 9B Neighboring gene putative transmembrane protein INAFM2 Neighboring gene serine/threonine-protein kinase PAK 6 Neighboring gene BUB1 mitotic checkpoint serine/threonine kinase Bb

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072463.1 Chromosome 15 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072463.1 Reference Afim_UVic_2022

    Range
    18641750..18659585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054613263.1 → XP_054469238.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

Nucleotide Protein
Heading Accession and Version

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