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pip5k1bb phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129100901, updated on 26-Mar-2024

Summary

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Gene symbol
pip5k1bb
Gene description
phosphatidylinositol-4-phosphate 5-kinase, type I, beta b
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
zebrafish all
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Genomic context

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See pip5k1bb in Genome Data Viewer
Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 13 NC_072461.1 (2893116..2922774, complement)

Chromosome 13 - NC_072461.1Genomic Context describing neighboring genes Neighboring gene ceramide transfer protein-like Neighboring gene polymerase (DNA directed) kappa Neighboring gene unc-45 myosin chaperone B Neighboring gene kinesin family member 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072461.1 Chromosome 13 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072461.1 Reference Afim_UVic_2022

    Range
    2893116..2922774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054610442.1 → XP_054466417.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases