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si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129099275, updated on 26-Mar-2024

Summary

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Gene symbol
si:dkey-150i13.2
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
zebrafish all
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Genomic context

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See si:dkey-150i13.2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 12 NC_072460.1 (25967682..25979784, complement)

Chromosome 12 - NC_072460.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting accessory protein 1a Neighboring gene tafazzin, phospholipid-lysophospholipid transacylase Neighboring gene small nucleolar RNA SNORA11 Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase Neighboring gene necdin-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072460.1 Chromosome 12 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP:ADP antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial ADP transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial ATP transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072460.1 Reference Afim_UVic_2022

    Range
    25967682..25979784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054608448.1 → XP_054464423.1  mitochondrial carnitine/acylcarnitine carrier protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases