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LOC129097015 phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129097015, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129097015
Gene description
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
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Genomic context

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See LOC129097015 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 10 NC_072458.1 (8046197..8056216)

Chromosome 10 - NC_072458.1Genomic Context describing neighboring genes Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like Neighboring gene extracellular matrix protein 1-like Neighboring gene 26S proteasome non-ATPase regulatory subunit 4-like Neighboring gene zinc finger protein 687b Neighboring gene small nucleolar RNA SNORA13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072458.1 Chromosome 10 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072458.1 Reference Afim_UVic_2022

    Range
    8046197..8056216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054605689.1 → XP_054461664.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like

  2. XM_054605690.1 → XP_054461665.1  phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases