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serping1 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129095689, updated on 12-Sep-2024

Summary

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Gene symbol
serping1
Gene description
serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
human zebrafish all
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Genomic context

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See serping1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 9 NC_072457.1 (9379940..9384768)

Chromosome 9 - NC_072457.1Genomic Context describing neighboring genes Neighboring gene aryl hydrocarbon receptor interacting protein Neighboring gene transmembrane protein 134 Neighboring gene double C2-like domains, gamma Neighboring gene calcium binding protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072457.1 Chromosome 9 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma protease C1 inhibitor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072457.1 Reference Afim_UVic_2022

    Range
    9379940..9384768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054604231.1 → XP_054460206.1  plasma protease C1 inhibitor

  2. XM_054604232.1 → XP_054460207.1  plasma protease C1 inhibitor

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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