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LOC129095397 toll-like receptor 2 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129095397, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129095397
Gene description
toll-like receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
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Genomic context

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See LOC129095397 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 9 NC_072457.1 (7914297..7916684, complement)

Chromosome 9 - NC_072457.1Genomic Context describing neighboring genes Neighboring gene lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog Neighboring gene protein disulfide isomerase family A, member 2 Neighboring gene transmembrane 131 like Neighboring gene meiotic nuclear divisions 1 homolog (S. cerevisiae)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072457.1 Chromosome 9 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072457.1 Reference Afim_UVic_2022

    Range
    7914297..7916684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054603820.1 → XP_054459795.1  toll-like receptor 2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases