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LOC129093095 toll-like receptor 2 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129093095, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129093095
Gene description
toll-like receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
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Genomic context

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See LOC129093095 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 7 NC_072455.1 (1228915..1235483)

Chromosome 7 - NC_072455.1Genomic Context describing neighboring genes Neighboring gene fibrinogen alpha chain Neighboring gene fibrinogen beta chain Neighboring gene eosinophil lineage-specific marker Neighboring gene serine protease FAM111A-like Neighboring gene ring finger protein 175

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072455.1 Chromosome 7 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: toll-like receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072455.1 Reference Afim_UVic_2022

    Range
    1228915..1235483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054601004.1 → XP_054456979.1  LOW QUALITY PROTEIN: toll-like receptor 2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases