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LOC129091832 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129091832, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129091832
Gene description
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC129091832 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 5 NC_072453.1 (17847641..17853108, complement)

Chromosome 5 - NC_072453.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 59 Neighboring gene U5 spliceosomal RNA Neighboring gene uncharacterized LOC129090936 Neighboring gene serine and arginine rich splicing factor 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072453.1 Chromosome 5 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072453.1 Reference Afim_UVic_2022

    Range
    17847641..17853108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054599529.1 → XP_054455504.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases