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SGMS1 sphingomyelin synthase 1 [ Pteronotus mesoamericanus ]

Gene ID: 129069985, updated on 5-Apr-2024

Summary

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Gene symbol
SGMS1
Gene description
sphingomyelin synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteronotus mesoamericanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus
Orthologs
human mouse all
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Genomic context

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See SGMS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_03 current CSHL_Meso_final (GCF_021234165.1) Unplaced Scaffold NW_026555100.1 (24059088..24342512, complement)

NW_026555100.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene APOBEC1 complementation factor Neighboring gene N-acylsphingosine amidohydrolase 2 Neighboring gene cold shock domain-containing protein E1-like Neighboring gene multiple inositol-polyphosphate phosphatase 1 Neighboring gene 40S ribosomal protein S2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026555100 Unplaced Scaffold Reference CSHL_Meso_final

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingomyelin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingomyelin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine:ceramide cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234165.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Meso_final

Genomic

  1. NW_026555100.1 Reference CSHL_Meso_final

    Range
    24059088..24342512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054572796.1 → XP_054428771.1  phosphatidylcholine:ceramide cholinephosphotransferase 1

  2. XM_054572795.1 → XP_054428770.1  phosphatidylcholine:ceramide cholinephosphotransferase 1

  3. XM_054572794.1 → XP_054428769.1  phosphatidylcholine:ceramide cholinephosphotransferase 1

  4. XM_054572793.1 → XP_054428768.1  phosphatidylcholine:ceramide cholinephosphotransferase 1

  5. XM_054572798.1 → XP_054428773.1  phosphatidylcholine:ceramide cholinephosphotransferase 1

  6. XM_054572799.1 → XP_054428774.1  phosphatidylcholine:ceramide cholinephosphotransferase 1

Nucleotide Protein
Heading Accession and Version

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