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SMPDL3A sphingomyelin phosphodiesterase acid like 3A [ Pteronotus mesoamericanus ]

Gene ID: 129067745, updated on 5-Apr-2024

Summary

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Gene symbol
SMPDL3A
Gene description
sphingomyelin phosphodiesterase acid like 3A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteronotus mesoamericanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus
Orthologs
human mouse all
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Genomic context

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See SMPDL3A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_03 current CSHL_Meso_final (GCF_021234165.1) Unplaced Scaffold NW_026555085.1 (73820844..73835795)

NW_026555085.1Genomic Context describing neighboring genes Neighboring gene cAMP-dependent protein kinase inhibitor beta Neighboring gene fatty acid binding protein 7 Neighboring gene 40S ribosomal protein SA-like Neighboring gene 40S ribosomal protein S29-like Neighboring gene clavesin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026555085 Unplaced Scaffold Reference CSHL_Meso_final

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid sphingomyelinase-like phosphodiesterase 3a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234165.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Meso_final

Genomic

  1. NW_026555085.1 Reference CSHL_Meso_final

    Range
    73820844..73835795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054569892.1 → XP_054425867.1  acid sphingomyelinase-like phosphodiesterase 3a

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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