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SFRP1 secreted frizzled related protein 1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128919574, updated on 3-Aug-2024

Summary

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Gene symbol
SFRP1
Gene description
secreted frizzled related protein 1
See related
EnsemblRapid:ENSRTRG00005015096
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See SFRP1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 20 NC_071485.1 (3688964..3707075)

Chromosome 20 - NC_071485.1Genomic Context describing neighboring genes Neighboring gene GINS complex subunit 4 Neighboring gene golgin A7 Neighboring gene zinc finger matrin-type 4 Neighboring gene transcriptional and immune response regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071485.1 Chromosome 20 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071485.1 Reference bRisTri1.patW.cur.20221130

    Range
    3688964..3707075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054224906.1 → XP_054080881.1  secreted frizzled-related protein 1

    UniProtKB/TrEMBL
    A0A7L3TFL3
    Related
    ENSRTRP00005019091.1, ENSRTRT00005020974.1
Nucleotide Protein
Heading Accession and Version

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