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B3GAT1 beta-1,3-glucuronyltransferase 1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128918666, updated on 3-Aug-2024

Summary

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Gene symbol
B3GAT1
Gene description
beta-1,3-glucuronyltransferase 1
See related
EnsemblRapid:ENSRTRG00005009194
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See B3GAT1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 17 NC_071482.1 (4836098..4896158)

Chromosome 17 - NC_071482.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128918712 Neighboring gene uncharacterized LOC128918701 Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene acyl-CoA dehydrogenase family member 8 Neighboring gene VPS26 retromer complex component B Neighboring gene thymocyte nuclear protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071482.1 Chromosome 17 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071482.1 Reference bRisTri1.patW.cur.20221130

    Range
    4836098..4896158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054223162.1 → XP_054079137.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

  2. XM_054223163.1 → XP_054079138.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    Related
    ENSRTRP00005011929.1, ENSRTRT00005012884.1

  3. XM_054223161.1 → XP_054079136.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

  4. XM_054223164.1 → XP_054079139.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X3

  5. XM_054223166.1 → XP_054079141.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X4

RNA

  1. XR_008469660.1 RNA Sequence

  2. XR_008469661.1 RNA Sequence

Nucleotide Protein
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