U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AGRN agrin [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128918381, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
AGRN
Gene description
agrin
See related
EnsemblRapid:ENSRTRG00005012408
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AGRN in Genome Data Viewer
Location:
chromosome: 16
Exon count:
37
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 16 NC_071481.1 (5971692..6104099)

Chromosome 16 - NC_071481.1Genomic Context describing neighboring genes Neighboring gene PPARGC1 and ESRR induced regulator, muscle 1 Neighboring gene hes family bHLH transcription factor 4 Neighboring gene tyrosine-protein phosphatase non-receptor type 11-like Neighboring gene ring finger protein 223

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_071481.1 Chromosome 16 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled acetylcholine receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor clustering IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
agrin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071481.1 Reference bRisTri1.patW.cur.20221130

    Range
    5971692..6104099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054222521.1 → XP_054078496.1  agrin isoform X1

    Related
    ENSRTRP00005016035.1, ENSRTRT00005017402.1

  2. XM_054222523.1 → XP_054078498.1  agrin isoform X2

    Related
    ENSRTRP00005016046.1, ENSRTRT00005017413.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.