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INPP5E inositol polyphosphate-5-phosphatase E [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128917730, updated on 3-Aug-2024

Summary

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Gene symbol
INPP5E
Gene description
inositol polyphosphate-5-phosphatase E
See related
EnsemblRapid:ENSRTRG00005007002
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See INPP5E in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 14 NC_071479.1 (3113806..3124622)

Chromosome 14 - NC_071479.1Genomic Context describing neighboring genes Neighboring gene notch receptor 1 Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene peptidase, mitochondrial processing subunit alpha Neighboring gene endosome associated trafficking regulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071479.1 Chromosome 14 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol polyphosphate 5-phosphatase type IV

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071479.1 Reference bRisTri1.patW.cur.20221130

    Range
    3113806..3124622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054221146.1 → XP_054077121.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X3

  2. XM_054221143.1 → XP_054077118.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X1

  3. XM_054221145.1 → XP_054077120.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X2

    UniProtKB/TrEMBL
    A0A7L3TC19
    Related
    ENSRTRP00005009070.1, ENSRTRT00005009743.1

RNA

  1. XR_008469334.1 RNA Sequence

  2. XR_008469335.1 RNA Sequence

  3. XR_008469336.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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