U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

POMT1 protein O-mannosyltransferase 1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128917697, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
POMT1
Gene description
protein O-mannosyltransferase 1
See related
EnsemblRapid:ENSRTRG00005005090
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See POMT1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 14 NC_071479.1 (895212..909059)

Chromosome 14 - NC_071479.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128917627 Neighboring gene proline rich coiled-coil 2B Neighboring gene small nucleolar RNA SNORD62 Neighboring gene uridine-cytidine kinase 1 Neighboring gene proline rich transmembrane protein 1B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_071479.1 Chromosome 14 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein O-mannosyl-transferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071479.1 Reference bRisTri1.patW.cur.20221130

    Range
    895212..909059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054221084.1 → XP_054077059.1  protein O-mannosyl-transferase 1 isoform X3

  2. XM_054221082.1 → XP_054077057.1  protein O-mannosyl-transferase 1 isoform X1

  3. XM_054221083.1 → XP_054077058.1  protein O-mannosyl-transferase 1 isoform X2

  4. XM_054221087.1 → XP_054077062.1  protein O-mannosyl-transferase 1 isoform X3

  5. XM_054221085.1 → XP_054077060.1  protein O-mannosyl-transferase 1 isoform X3

    Related
    ENSRTRP00005006538.1, ENSRTRT00005007059.1

  6. XM_054221086.1 → XP_054077061.1  protein O-mannosyl-transferase 1 isoform X3

  7. XM_054221088.1 → XP_054077063.1  protein O-mannosyl-transferase 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.