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GNPTAB N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128916128, updated on 3-Aug-2024

Summary

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Gene symbol
GNPTAB
Gene description
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta
See related
EnsemblRapid:ENSRTRG00005014992
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See GNPTAB in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 1 NC_071466.1 (157807815..157854220, complement)

Chromosome 1 - NC_071466.1Genomic Context describing neighboring genes Neighboring gene myosin binding protein C1 Neighboring gene choline phosphotransferase 1 Neighboring gene synaptonemal complex protein 3 Neighboring gene DNA damage regulated autophagy modulator 1 Neighboring gene WASH complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071466.1 Chromosome 1 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosamine-1-phosphotransferase subunits alpha/beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071466.1 Reference bRisTri1.patW.cur.20221130

    Range
    157807815..157854220 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054217412.1 → XP_054073387.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X1

    Related
    ENSRTRP00005018960.1, ENSRTRT00005020834.1

  2. XM_054217420.1 → XP_054073395.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X2

  3. XM_054217438.1 → XP_054073413.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X4

  4. XM_054217444.1 → XP_054073419.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X5

  5. XM_054217429.1 → XP_054073404.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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