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TKT transketolase [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128915898, updated on 3-Aug-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
See related
EnsemblRapid:ENSRTRG00005005029
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 10 NC_071475.1 (367578..396322, complement)

Chromosome 10 - NC_071475.1Genomic Context describing neighboring genes Neighboring gene FA complementation group D2 Neighboring gene transmembrane protein 40 Neighboring gene BRICK1 subunit of SCAR/WAVE actin nucleating complex Neighboring gene decapping mRNA 1A Neighboring gene calcium voltage-gated channel subunit alpha1 D Neighboring gene choline dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071475.1 Chromosome 10 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071475.1 Reference bRisTri1.patW.cur.20221130

    Range
    367578..396322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054216780.1 → XP_054072755.1  transketolase

    UniProtKB/TrEMBL
    A0A7L3T795
    Related
    ENSRTRP00005006455.1, ENSRTRT00005006976.1

  2. XM_054216779.1 → XP_054072754.1  transketolase

    UniProtKB/TrEMBL
    A0A7L3T795
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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