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PRPS1 phosphoribosyl pyrophosphate synthetase 1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128914838, updated on 3-Aug-2024

Summary

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Gene symbol
PRPS1
Gene description
phosphoribosyl pyrophosphate synthetase 1
See related
EnsemblRapid:ENSRTRG00005000184
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See PRPS1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 9 NC_071474.1 (43689552..43701829)

Chromosome 9 - NC_071474.1Genomic Context describing neighboring genes Neighboring gene thymosin beta-15A homolog Neighboring gene nuclear pore glycoprotein p62-like Neighboring gene dynein axonemal assembly factor 6 Neighboring gene FERM and PDZ domain containing 3 Neighboring gene RAB9B, member RAS oncogene family Neighboring gene glycine receptor subunit alpha-4 Neighboring gene proteolipid protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071474.1 Chromosome 9 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribose phosphate diphosphokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5-phosphoribose 1-diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribonucleoside monophosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribose phosphate diphosphokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribose-phosphate pyrophosphokinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071474.1 Reference bRisTri1.patW.cur.20221130

    Range
    43689552..43701829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054214478.1 → XP_054070453.1  ribose-phosphate pyrophosphokinase 1

    Related
    ENSRTRP00005000215.1, ENSRTRT00005000239.1
Nucleotide Protein
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