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CPT2 carnitine palmitoyltransferase 2 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128913546, updated on 3-Aug-2024

Summary

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Gene symbol
CPT2
Gene description
carnitine palmitoyltransferase 2
See related
EnsemblRapid:ENSRTRG00005012569
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See CPT2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 8 NC_071473.1 (49165733..49178713)

Chromosome 8 - NC_071473.1Genomic Context describing neighboring genes Neighboring gene podocan Neighboring gene solute carrier family 1 member 7 Neighboring gene CXXC motif containing zinc binding protein Neighboring gene mago homolog, exon junction complex subunit Neighboring gene LDL receptor related protein 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071473.1 Chromosome 8 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071473.1 Reference bRisTri1.patW.cur.20221130

    Range
    49165733..49178713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054211320.1 → XP_054067295.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X2

  2. XM_054211322.1 → XP_054067297.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X4

    Related
    ENSRTRP00005016267.1, ENSRTRT00005017634.1

  3. XM_054211321.1 → XP_054067296.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X3

  4. XM_054211319.1 → XP_054067294.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X1

Nucleotide Protein
Heading Accession and Version

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