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ATP6V0B ATPase H+ transporting V0 subunit b [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128913540, updated on 3-Aug-2024

Summary

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Gene symbol
ATP6V0B
Gene description
ATPase H+ transporting V0 subunit b
See related
EnsemblRapid:ENSRTRG00005014279 EnsemblRapid:ENSRTRG00005014546
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See ATP6V0B in Genome Data Viewer
Location:
chromosome: 8
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 8 NC_071473.1 (43866352..43882643)

Chromosome 8 - NC_071473.1Genomic Context describing neighboring genes Neighboring gene importin 13 Neighboring gene diphthamide biosynthesis 2 Neighboring gene solute carrier family 6 member 9 Neighboring gene Krueppel-like factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071473.1 Chromosome 8 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase 21 kDa proteolipid subunit c''

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071473.1 Reference bRisTri1.patW.cur.20221130

    Range
    43866352..43882643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054211295.1 → XP_054067270.1  V-type proton ATPase 21 kDa proteolipid subunit c'' isoform X1

  2. XM_054211300.1 → XP_054067275.1  V-type proton ATPase 21 kDa proteolipid subunit c'' isoform X5

    Related
    ENSRTRP00005018384.1, ENSRTRT00005020207.1

  3. XM_054211296.1 → XP_054067271.1  V-type proton ATPase 21 kDa proteolipid subunit c'' isoform X2

  4. XM_054211298.1 → XP_054067273.1  V-type proton ATPase 21 kDa proteolipid subunit c'' isoform X3

    Related
    ENSRTRP00005018036.1, ENSRTRT00005019830.1

  5. XM_054211299.1 → XP_054067274.1  V-type proton ATPase 21 kDa proteolipid subunit c'' isoform X4

Nucleotide Protein
Heading Accession and Version

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