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NPL N-acetylneuraminate pyruvate lyase [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128913509, updated on 3-Aug-2024

Summary

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Gene symbol
NPL
Gene description
N-acetylneuraminate pyruvate lyase
See related
EnsemblRapid:ENSRTRG00005002145
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See NPL in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 8 NC_071473.1 (27993271..28003592, complement)

Chromosome 8 - NC_071473.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128914024 Neighboring gene DExH-box helicase 9 Neighboring gene protein SOGA3-like Neighboring gene uncharacterized LOC128913515 Neighboring gene small nucleolar RNA SNORD47 Neighboring gene heme binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071473.1 Chromosome 8 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylneuraminate lyase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071473.1 Reference bRisTri1.patW.cur.20221130

    Range
    27993271..28003592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054211215.1 → XP_054067190.1  N-acetylneuraminate lyase isoform X1

    Related
    ENSRTRP00005002898.1, ENSRTRT00005003051.1

  2. XM_054211216.1 → XP_054067191.1  N-acetylneuraminate lyase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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