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SLC11A1 solute carrier family 11 member 1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128913121, updated on 3-Aug-2024

Summary

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Gene symbol
SLC11A1
Gene description
solute carrier family 11 member 1
See related
EnsemblRapid:ENSRTRG00005012735
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See SLC11A1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 7 NC_071472.1 (17790086..17796409)

Chromosome 7 - NC_071472.1Genomic Context describing neighboring genes Neighboring gene PNKD metallo-beta-lactamase domain containing Neighboring gene transmembrane BAX inhibitor motif containing 1 Neighboring gene ciliogenesis associated TTC17 interacting protein Neighboring gene CTD small phosphatase 1 Neighboring gene villin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071472.1 Chromosome 7 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
natural resistance-associated macrophage protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071472.1 Reference bRisTri1.patW.cur.20221130

    Range
    17790086..17796409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054210186.1 → XP_054066161.1  natural resistance-associated macrophage protein 1 isoform X1

  2. XM_054210189.1 → XP_054066164.1  natural resistance-associated macrophage protein 1 isoform X4

  3. XM_054210187.1 → XP_054066162.1  natural resistance-associated macrophage protein 1 isoform X2

    Related
    ENSRTRP00005016431.1, ENSRTRT00005017834.1

  4. XM_054210188.1 → XP_054066163.1  natural resistance-associated macrophage protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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