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TMEM199 transmembrane protein 199 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128912512, updated on 3-Aug-2024

Summary

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Gene symbol
TMEM199
Gene description
transmembrane protein 199
See related
EnsemblRapid:ENSRTRG00005008571
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See TMEM199 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 7 NC_071472.1 (53227964..53230691, complement)

Chromosome 7 - NC_071472.1Genomic Context describing neighboring genes Neighboring gene vitronectin Neighboring gene kinesin-like protein KIF12 Neighboring gene SEBOX homeobox Neighboring gene DNA polymerase delta interacting protein 2 Neighboring gene TSR1 ribosome maturation factor Neighboring gene small nucleolar RNA SNORD91 family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071472.1 Chromosome 7 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 199

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071472.1 Reference bRisTri1.patW.cur.20221130

    Range
    53227964..53230691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054208555.1 → XP_054064530.1  transmembrane protein 199 isoform X2

  2. XM_054208554.1 → XP_054064529.1  transmembrane protein 199 isoform X1

    UniProtKB/TrEMBL
    A0A7L3T5B5
    Related
    ENSRTRP00005011094.1, ENSRTRT00005012003.1
Nucleotide Protein
Heading Accession and Version

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