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SMC3 structural maintenance of chromosomes 3 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128911826, updated on 3-Aug-2024

Summary

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Gene symbol
SMC3
Gene description
structural maintenance of chromosomes 3
See related
EnsemblRapid:ENSRTRG00005016434
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See SMC3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 6 NC_071471.1 (61991223..62017160)

Chromosome 6 - NC_071471.1Genomic Context describing neighboring genes Neighboring gene survival motor neuron domain containing 1 Neighboring gene dual specificity phosphatase 5 Neighboring gene uncharacterized LOC128911827 Neighboring gene RNA binding motif protein 20 Neighboring gene uncharacterized LOC128911828

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071471.1 Chromosome 6 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cohesin loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
structural maintenance of chromosomes protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071471.1 Reference bRisTri1.patW.cur.20221130

    Range
    61991223..62017160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054207298.1 → XP_054063273.1  structural maintenance of chromosomes protein 3 isoform X1

    Related
    ENSRTRP00005020956.1, ENSRTRT00005023133.1

  2. XM_054207299.1 → XP_054063274.1  structural maintenance of chromosomes protein 3 isoform X2

    Related
    ENSRTRP00005020939.1, ENSRTRT00005023116.1
Nucleotide Protein
Heading Accession and Version

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