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OGDHL oxoglutarate dehydrogenase L [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128911824, updated on 3-Aug-2024

Summary

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Gene symbol
OGDHL
Gene description
oxoglutarate dehydrogenase L
See related
EnsemblRapid:ENSRTRG00005010980
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See OGDHL in Genome Data Viewer
Location:
chromosome: 6
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 6 NC_071471.1 (43225160..43283883)

Chromosome 6 - NC_071471.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim23 Neighboring gene small nucleolar RNA SNORA74 Neighboring gene poly(ADP-ribose) glycohydrolase Neighboring gene choline O-acetyltransferase Neighboring gene solute carrier family 18 member A3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071471.1 Chromosome 6 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oxoglutarate dehydrogenase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoglutarate dehydrogenase-like, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071471.1 Reference bRisTri1.patW.cur.20221130

    Range
    43225160..43283883
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054207295.1 → XP_054063270.1  2-oxoglutarate dehydrogenase-like, mitochondrial isoform X1

    Related
    ENSRTRP00005014212.1, ENSRTRT00005015439.1

  2. XM_054207296.1 → XP_054063271.1  2-oxoglutarate dehydrogenase-like, mitochondrial isoform X2

RNA

  1. XR_008467186.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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