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UXS1 UDP-glucuronate decarboxylase 1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128910776, updated on 3-Aug-2024

Summary

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Gene symbol
UXS1
Gene description
UDP-glucuronate decarboxylase 1
See related
EnsemblRapid:ENSRTRG00005014246
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See UXS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 1 NC_071466.1 (70720263..70785721)

Chromosome 1 - NC_071466.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 5 member 7 Neighboring gene pinopsin-like Neighboring gene ST6 beta-galactoside alpha-2,6-sialyltransferase 2 Neighboring gene ECRG4 augurin precursor Neighboring gene NCK adaptor protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071466.1 Chromosome 1 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucuronate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronic acid decarboxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071466.1 Reference bRisTri1.patW.cur.20221130

    Range
    70720263..70785721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054204444.1 → XP_054060419.1  UDP-glucuronic acid decarboxylase 1 isoform X1

    Related
    ENSRTRP00005017996.1, ENSRTRT00005019784.1

  2. XM_054204470.1 → XP_054060445.1  UDP-glucuronic acid decarboxylase 1 isoform X4

  3. XM_054204463.1 → XP_054060438.1  UDP-glucuronic acid decarboxylase 1 isoform X3

  4. XM_054204455.1 → XP_054060430.1  UDP-glucuronic acid decarboxylase 1 isoform X2

  5. XM_054204489.1 → XP_054060464.1  UDP-glucuronic acid decarboxylase 1 isoform X6

  6. XM_054204480.1 → XP_054060455.1  UDP-glucuronic acid decarboxylase 1 isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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