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PGM2 phosphoglucomutase 2 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128910741, updated on 3-Aug-2024

Summary

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Gene symbol
PGM2
Gene description
phosphoglucomutase 2
See related
EnsemblRapid:ENSRTRG00005011386
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See PGM2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 5 NC_071470.1 (16955851..16975842, complement)

Chromosome 5 - NC_071470.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 3 Neighboring gene TBC1 domain family member 1 Neighboring gene RELT like 1 Neighboring gene chromosome 5 C4orf19 homolog Neighboring gene NACHT and WD repeat domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071470.1 Chromosome 5 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopentomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine ribonucleoside salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphopentomutase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071470.1 Reference bRisTri1.patW.cur.20221130

    Range
    16955851..16975842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054204360.1 → XP_054060335.1  phosphopentomutase

    Related
    ENSRTRP00005014689.1, ENSRTRT00005015967.1
Nucleotide Protein
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Gene LinkOut

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