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LOC128910481 toll-like receptor 2 type-1 [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128910481, updated on 3-Aug-2024

Summary

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Gene symbol
LOC128910481
Gene description
toll-like receptor 2 type-1
See related
EnsemblRapid:ENSRTRG00005002215
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
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Genomic context

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See LOC128910481 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 5 NC_071470.1 (48129021..48152755, complement)

Chromosome 5 - NC_071470.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 175 Neighboring gene toll like receptor 2 Neighboring gene transmembrane 131 like Neighboring gene uncharacterized LOC128910195

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071470.1 Chromosome 5 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 2 type-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071470.1 Reference bRisTri1.patW.cur.20221130

    Range
    48129021..48152755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054203729.1 → XP_054059704.1  toll-like receptor 2 type-1

  2. XM_054203731.1 → XP_054059706.1  toll-like receptor 2 type-1

    Related
    ENSRTRP00005002926.1, ENSRTRT00005003085.1

  3. XM_054203732.1 → XP_054059707.1  toll-like receptor 2 type-1

    Related
    ENSRTRP00005002924.1, ENSRTRT00005003083.1

  4. XM_054203730.1 → XP_054059705.1  toll-like receptor 2 type-1

    Related
    ENSRTRP00005002922.1, ENSRTRT00005003081.1

  5. XM_054203733.1 → XP_054059708.1  toll-like receptor 2 type-1

Nucleotide Protein
Heading Accession and Version

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