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BCKDHB branched chain keto acid dehydrogenase E1 subunit beta [ Rissa tridactyla (black-legged kittiwake) ]

Gene ID: 128906718, updated on 3-Aug-2024

Summary

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Gene symbol
BCKDHB
Gene description
branched chain keto acid dehydrogenase E1 subunit beta
See related
EnsemblRapid:ENSRTRG00005009537
Gene type
protein coding
RefSeq status
MODEL
Organism
Rissa tridactyla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa
Orthologs
human mouse all
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Genomic context

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See BCKDHB in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current bRisTri1.patW.cur.20221130 (GCF_028500815.1) 3 NC_071468.1 (90292015..90421584, complement)

Chromosome 3 - NC_071468.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128907375 Neighboring gene terminal nucleotidyltransferase 5A Neighboring gene nuclear receptor subfamily 0 group B member 2-like Neighboring gene TTK protein kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_071468.1 Chromosome 3 Reference bRisTri1.patW.cur.20221130

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028500815.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bRisTri1.patW.cur.20221130

Genomic

  1. NC_071468.1 Reference bRisTri1.patW.cur.20221130

    Range
    90292015..90421584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054194497.1 → XP_054050472.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X2

  2. XM_054194496.1 → XP_054050471.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    Related
    ENSRTRP00005012361.1, ENSRTRT00005013378.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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